Job Description P39099 Confidence 98.62% Date Thu Jan 5 11:58:15 GMT 2012 Rank 240 Aligned Residues 159 % Identity 17% Template c2xrcD_ PDB info PDB header:immune system Chain: D: PDB Molecule:human complement factor i; PDBTitle: human complement factor i Resolution 2.69 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																				.															.	.	.	.	.	.	.										.	.	.	.	.										.
Query SS confidence																																				.															.	.	.	.	.	.	.										.	.	.	.	.										.
Query Sequence		L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	N	D	G	.	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	.	.	.	.	.	.	.	D	I	A	L	L	Q	I	Q	N	.	.	.	.	.	P	S	K	L	T	Q	I	A	I	.
Query Conservation																																				.															.	.	.	.	.	.	.										.	.	.	.	.										.
Alig confidence												.	.																							.															.	.	.	.	.	.	.										.	.	.	.	.										.
Template Conservation												.	.
Template Sequence		T	C	G	G	I	Y	I	G	G	C	.	.	W	I	L	T	A	A	H	C	L	R	A	S	K	T	H	R	Y	Q	I	W	T	T	I	V	I	E	Y	V	D	R	I	I	F	H	E	N	Y	N	A	G	T	Y	Q	N	D	I	A	L	I	E	M	K	K	D	G	N	K	K	D	C	E	L	P	P	A	C	V	P
Template Known Secondary structure									S	T	T	.	.						S	T	T	G	G	G		S	S																					T	T			S	S	S		T	T											S	T	T									B
Template Predicted Secondary structure												.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.			.	.	.	.	.	230
Predicted Secondary structure																																																						.	.												.	.						.	.
Query SS confidence																																																						.	.												.	.						.	.
Query Sequence		A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	.	.	I	N	R	G	N	S	G	G	A	L	L	.	.	N	L	N	G	E	.	.	L	I	G	I	N	T
Query Conservation																																																						.	.												.	.						.	.
Alig confidence																				.	.	.	.	.	.	.																												.	.												.	.						.	.
Template Conservation																				.	.	.	.	.	.	.
Template Sequence		W	S	P	Y	L	F	Q	P	N	D	T	C	I	V	S	G	W	G	.	.	.	.	.	.	.	E	V	K	L	I	S	N	C	S	K	F	Y	G	N	R	F	Y	E	K	E	M	E	C	A	G	T	Y	D	G	S	I	D	A	C	S	G	G	P	L	V	C	M	D	A	N	N	V	T	Y	V	W	G	V	V	S
Template Known Secondary structure		S		T	T	S	S		S	S										.	.	.	.	.	.	.						S		T	T	T	T	S	S	T	T			T	T	T								S	S															T	T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.								.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	G	E	N	C	G	K	P	E	F	P	G	V	Y	T	K	V	A	N	Y	F	D	W	I	S	Y	H	V
Template Known Secondary structure				S	T	T	T	S	T	T								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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