Job Description P39099 Confidence 96.48% Date Thu Jan 5 11:58:15 GMT 2012 Rank 309 Aligned Residues 113 % Identity 20% Template c2wv9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flavivirin protease ns2b regulatory subunit, flavivirin PDBTitle: crystal structure of the ns3 protease-helicase from murray2 valley encephalitis virus Resolution 2.75 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	D	I	A	L	L	Q	I	Q	N	P	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V
Query Conservation
Alig confidence								.	.	.														.	.	.	.											.	.																	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.														.	.	.	.											.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	G	V	M	H	.	.	.	E	G	V	F	H	T	L	W	H	T	T	R	G	.	.	.	.	A	A	I	M	S	G	E	G	R	L	.	.	T	P	Y	W	G	N	V	K	E	D	R	V	T	Y	G	G	.	.	.	.	.	.	.	.	.	P	W	K	L	D	Q	K	W	N	G	V	D	D	V	Q	M	I
Template Known Secondary structure								.	.	.	T	T										T	T	.	.	.	.						S	S	S			.	.							T	T	T	T					S	S	.	.	.	.	.	.	.	.	.	S									T	T
Template Predicted Secondary structure								.	.	.														.	.	.	.											.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.										.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	E	L	I	G	I
Query Conservation
Alig confidence							.	.	.	.																													.	.
Template Conservation							.	.	.	.																													.	.
Template Sequence		V	V	E	P	G	.	.	.	.	K	P	A	I	N	V	Q	T	K	P	G	I	F	K	T	A	H	G	E	I	G	A	V	S	L	D	Y	P	.	.	I	G	T	S	G	S	P	I	V	N	S	N	G	E	I	I	G	L
Template Known Secondary structure					T	T	.	.	.	.	S															S	S	S											.	.	G	G	G	T	T						T	T	S
Template Predicted Secondary structure							.	.	.	.																													.	.
Template SS confidence
		99	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions