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Job DescriptionP39099
Confidence99.80%DateThu Jan 5 11:58:15 GMT 2012
Rank37Aligned Residues164
% Identity20%Templatec2w7uC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:serine protease spla; PDBTitle: spla serine protease of staphylococcus aureus (2.4a)
Resolution2.43 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   90.........100.........110.........120. ........130.........140......... 150....
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Query Sequence  GLGSGVIINASKGYVLTNNHVINQAQKISIQL. . . . . . . . . NDGREFDAKLIGSDDQSDIALLQIQNPS. . . . . . KLTQI
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Template Sequence  VGGTGVVVGKN. . TIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNKNVS
Template Known Secondary structure  TTTT..
GGGGTT
T

TTS




SSSS


SB
SSS
BSTTT

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   22.......30.. .......40.........50.........60.........70.........80.........90.........
 
   155....160.........170.........180.........190.........200.........210.........220.........230....
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Query Sequence  AIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILA
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Template Sequence  YTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISG. . . . . TFMEFDAYAQPGNSGSPVLNSKHELIGILYAGSG
Template Known Secondary structure 


B
S


TT

SSTTTTSS

T.....T


B
TT
TT

TT

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   100.........110.........120.........130.........140 .........150.........160.........170....
 
   235....240.........250.........260
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Query Sequence  PGGGSVGIGFAIPSNMARTLAQQLID
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Template Sequence  KDESEKNFGVYFTPQLKEFIQNNIEK
Template Known Secondary structure  SS
BSS

TS

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   175....180.........190.........200
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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