Job Description P39099 Confidence 99.93% Date Thu Jan 5 11:58:15 GMT 2012 Rank 24 Aligned Residues 148 % Identity 18% Template c2w5eB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative serine protease; PDBTitle: structural and biochemical analysis of human pathogenic2 astrovirus serine protease at 2.0 angstrom resolution Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	S	V	R	V	E	G	T	A	S	Q	G	Q	K	I	P	E	E	F	K	K	F	F	G	D	D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	N	D	G	R	E	F	D	A	K	L
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.																					.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.																					.
Template Sequence		A	L	C	V	I	D	T	P	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	T	G	F	F	S	G	.	.	.	N	D	I	V	T	A	A	H	V	V	G	N	N	T	F	V	N	V	C	Y	.	E	G	L	M	Y	E	A	K	V
Template Known Secondary structure		G							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	.	.	.	T										T	T		S							.	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.																					.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.																														.	.	.	.	450	.	.	.				.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.		.	.	.	.	.	.	480	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	S	D	D	Q	S	D	I	A	L	L	Q	I	Q	N	P	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	N	R
Query Conservation
Alig confidence								.								.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.								.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Y	M	P	E	K	.	D	I	A	F	I	T	C	.	P	G	D	L	H	P	T	A	R	L	K	L	S	K	N	P	D	Y	S	C	V	T	V	M	A	Y	V	N	E	D	L	V	V	S	T	A	A	A	M	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	G	N	T	L	S	Y	A	V	R	T	Q	D
Template Known Secondary structure						S	S	.	S							.		T	T				S					B		S	S			T	T									T	T													.	.	.	.	.	.	.	.	.	.	.	.	T	T							S		S	S
Template Predicted Secondary structure								.								.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		483	.	.	.	.	.		.	490	.	.	.	.	.		.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.													.	.	.	540	.	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	S	G	G	A	L	L	N	L	N	G	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N
Query Conservation
Alig confidence																									.	.	.
Template Conservation																									.	.	.
Template Sequence		G	M	S	G	A	P	V	C	D	K	Y	C	R	V	L	A	V	H	Q	T	N	T	G	.	.	.	Y	T	G	G	A	V	I	I	D	P	T	D
Template Known Secondary structure				T	T						T	T	S											T	.	.	.	T									G	G	G
Template Predicted Secondary structure																									.	.	.
Template SS confidence
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.				.	.	.	.	.	.	.	.	580	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions