Job Description P39099 Confidence 96.31% Date Thu Jan 5 11:58:15 GMT 2012 Rank 312 Aligned Residues 113 % Identity 19% Template c2vbcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dengue 4 ns3 full-length protein; PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus Resolution 3.15 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	D	I	A	L	L	Q	I	Q	N	P	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V
Query Conservation
Alig confidence								.	.	.														.	.	.	.														.	.												.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.														.	.	.	.														.	.												.	.	.	.	.	.	.	.	.
Template Sequence		G	V	G	I	H	M	.	.	.	E	G	V	F	H	T	M	W	H	V	T	R	G	.	.	.	.	S	V	I	C	H	E	T	G	R	L	E	P	S	.	.	W	A	D	V	R	N	D	M	I	S	Y	.	.	.	.	.	.	.	.	.	G	G	G	W	R	L	G	D	K	W	D	K	E	E	D	V	Q	V	L
Template Known Secondary structure								.	.	.	T	T										T	T	.	.	.	.						S	S							.	.				T	T	T	T					.	.	.	.	.	.	.	.	.	S	S	S									S	S
Template Predicted Secondary structure								.	.	.														.	.	.	.														.	.												.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	E	L	I	G	I
Query Conservation
Alig confidence														.	.	.	.																						.	.
Template Conservation														.	.	.	.																						.	.
Template Sequence		A	I	E	P	G	K	N	P	K	H	V	Q	.	.	.	.	T	K	P	G	L	F	K	T	L	T	G	E	I	G	A	V	T	L	D	F	K	.	.	P	G	T	S	G	S	P	I	I	N	K	K	G	K	V	I	G	L
Template Known Secondary structure					T	T	S							.	.	.	.									S	S	S											.	.	T	T		T	T						S	S	S	S
Template Predicted Secondary structure														.	.	.	.																						.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions