Job Description P39099 Confidence 98.12% Date Thu Jan 5 11:58:15 GMT 2012 Rank 262 Aligned Residues 145 % Identity 19% Template c2vb0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:polyprotein 3bcd; PDBTitle: crystal structure of coxsackievirus b3 proteinase 3c Resolution 2.40 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.																			.
Query SS confidence																																															.	.																			.
Query Sequence		S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	.	.	S	D	I	A	L	L	Q	I	Q	N	P	S	K	L	T	Q	I	A	.	I	A	D	S	D	K	L	R	V	G	D	F	A	V
Query Conservation																																															.	.																			.
Alig confidence										.	.								.																												.	.																			.
Template Conservation										.	.								.
Template Sequence		T	M	L	G	I	Y	D	R	.	.	W	A	V	L	P	R	H	.	A	K	P	G	P	T	I	L	M	N	D	Q	E	V	G	V	L	D	A	K	E	L	V	D	K	D	G	T	N	L	E	L	T	L	L	K	L	N	R	N	E	K	F	R	D	I	R	G	F	L	A	K	E	E	V	E	V	N	E	A	V	L
Template Known Secondary structure								B	T	.	.						G	G	.	G				S					S	S	S													T	T	S													S			B				G	G	G	S		S	S
Template Predicted Secondary structure										.	.								.
Template SS confidence
		26	.	.	.	30	.	.	.			.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S
Query Conservation
Alig confidence																																																					.	.										.	.	.	.	.	.
Template Conservation																																																					.	.										.	.	.	.	.	.
Template Sequence		A	I	N	T	S	K	F	P	N	M	Y	I	P	V	G	Q	V	T	E	Y	G	F	L	N	L	G	G	T	P	T	K	R	M	L	M	Y	N	F	P	T	R	A	G	Q	G	G	V	L	M	S	T	.	.	G	K	V	L	G	I	H	V	G	.	.	.	.	.	.	G	N	G	H	Q	G	F	S	A	A	L
Template Known Secondary structure					S	S	S	S	T	T																	T	T															T	T								T	.	.	T									.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																																					.	.										.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions