Job Description P39099 Confidence 99.19% Date Thu Jan 5 11:58:15 GMT 2012 Rank 97 Aligned Residues 78 % Identity 26% Template c2v90E_ PDB info PDB header:protein-binding Chain: E: PDB Molecule:pdz domain-containing protein 3; PDBTitle: crystal structure of the 3rd pdz domain of intestine- and2 kidney-enriched pdz domain ikepp (pdzd3) Resolution 2.00 Å

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		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A	I	I	A	L	Q	I	V	R	G	N
Query Conservation																																																								.	.
Alig confidence																																																								.	.
Template Conservation
Template Sequence		E	K	G	P	Q	G	F	G	F	L	L	R	E	E	K	G	L	D	G	R	P	G	Q	F	L	W	E	V	D	P	G	L	P	A	K	K	A	G	M	Q	A	G	D	R	L	V	A	V	A	G	E	S	V	E	G	L	G	H	E	E	T	V	S	R	I	Q	G	Q	G	S	C	V	S	L	T	V	V	D	P	E
Template Known Secondary structure				B	T	T	B	S										T	T	S											T	T	S					T	T			T	T							T	T				T	T												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions