Job Description P39099 Confidence 100.00% Date Thu Jan 5 11:58:15 GMT 2012 Rank 10 Aligned Residues 268 % Identity 46% Template c2r3yC_ PDB info PDB header:hydrolase/hydrolase activator Chain: C: PDB Molecule:protease degs; PDBTitle: crystal structure of the degs protease in complex with the2 ywf activating peptide Resolution 2.50 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	P	M	L	E	K	V	L	P	A	V	V	S	V	R	V	E	G	T	A	S	Q	G	Q	K	I	P	E	E	F	K	K	F	F	G	D	D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		S	Y	N	L	A	V	R	R	A	A	P	A	V	V	N	V	Y	N	R	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Q	L	E	I	R	T	L	G	S	G	V	I	M	D	Q	.	R	G	Y	I	I	T	N	K	H	V	I	N	D	A	D	Q	I	I	V	A
Template Known Secondary structure											G	G	G										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S	T	.	T											T	T		S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.																							.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	D	I	A	L	L	Q	I	Q	N	P	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	D	G	R	V	F	E	A	L	L	V	G	S	D	S	L	T	D	L	A	V	L	K	I	N	A	T	G	G	L	P	T	I	P	I	N	A	R	R	V	P	H	I	G	D	V	V	L	A	I	G	N	P	Y	N	L	G	Q	T	I	T	Q	G	I	I	S	A	T	G	R	I	G	L	N	P	T	G	R	Q
Template Known Secondary structure			T	T	S												T	T	T	T										S									T	T					T	T									G	G	G	S																	S	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		N	F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	.	.	.	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D	F	G	E	I	K	R	G	L	L	G	I	K	G	T	E	M	S
Query Conservation																																										.	.	.
Alig confidence																																										.	.	.																																.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		N	F	L	Q	T	D	A	S	I	N	H	G	N	S	G	G	A	L	V	N	S	L	G	E	L	M	G	I	N	T	L	S	F	D	K	S	N	D	G	E	T	P	E	G	I	G	F	A	I	P	F	Q	L	A	T	K	I	M	D	K	L	I	R	D	G	R	V	I	R	G	Y	I	G	I	.	.	.	.	.	.
Template Known Secondary structure								S				T	T		T	T						T	T															S	S	S					S																					S	S							S		.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	I	A	K	A	F	N	L	D	V	Q	R	G	A	F	V	S	E	V	L	P	G	S	G	S	A	K	A	G	V	K	A	G	D	I	I	T	S	L	N	G	K	P	L	N	S	F	A	E	L	R	S	R	I	A	T	T	E	P	G	T	K	V	K	L	G	L	L	R	N	G	K	P	L	E	V	E	V	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	G	I	V	V	N	E	V	S	P	D	G	P	A	A	N	A	G	I	Q	V	N	D	L	I	I	S	V	D	N	K	P	A	.	.	.	.	.	T	M	D	Q	V	A	E	I	R	P	G	S	V	I	P	V	V	V	L	Q	.	.	.	.	.	.	.	.	V	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.					B			S	S				G	G	G	T	T	T			S	S	B					B	S	S				.	.	.	.	.							T	S		T	T					B					.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.																					.	.	.	.	.	.	.	.
Template SS confidence
														262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.						.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.									.	.
		358	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	T	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	E	Y	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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