Job Description P39099 Confidence 99.07% Date Thu Jan 5 11:58:15 GMT 2012 Rank 168 Aligned Residues 79 % Identity 16% Template c2qktB_ PDB info PDB header:peptide binding protein Chain: B: PDB Molecule:inactivation-no-after-potential d protein; PDBTitle: crystal structure of the 5th pdz domain of inad Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure																																														.																	.	.
Query SS confidence																																														.																	.	.
Query Sequence		S	S	A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	.	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A	I	I	A
Query Conservation																																														.																	.	.
Alig confidence																								.	.	.																				.																	.	.
Template Conservation																								.	.	.
Template Sequence		E	K	F	N	V	D	L	M	K	K	A	G	K	E	L	G	L	S	L	S	P	N	.	.	.	E	I	G	C	T	I	A	D	L	I	Q	G	Q	Y	P	E	I	D	S	K	L	Q	R	G	D	I	I	T	K	F	N	G	D	A	L	E	G	L	P	F	Q	V	C	Y	A	L	F	K	G	A	N	G	K	V	S
Template Known Secondary structure												T	T											.	.	.	T	T									T	T	S						T	T			T	T							T	T				T	T	S		T						T	T	T	T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.				.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.
		441	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	I	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	V	T	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		658	.	660	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions