Job Description P39099 Confidence 99.63% Date Thu Jan 5 11:58:15 GMT 2012 Rank 49 Aligned Residues 93 % Identity 28% Template c2p3wB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:probable serine protease htra3; PDBTitle: crystal structure of the htra3 pdz domain bound to a phage-derived2 ligand (fgrwv) Resolution 1.70 Å

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		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	I	K	R	G	L	L	G	I	K	G	T	E	M	S	A	D	I	A	K	A	F	N	L	D	V	Q	R	G	A	F	V	S	E	V	L	P	G	S	G	S	A	K	A	G	V	K	A	G	D	I	I	T	S	L	N	G	K	P	L	N	S	F	A	E	L	R	S	R	I	A	T	T	E	P	G	T	K	V
Query Conservation
Alig confidence																												.	.																																														.	.	.
Template Conservation																												.	.																																														.	.	.
Template Sequence		G	S	H	M	K	R	F	I	G	I	R	M	R	T	I	T	P	S	L	V	D	E	P	E	V	S	.	.	S	G	I	Y	V	Q	E	V	A	P	N	S	P	S	Q	R	G	G	I	Q	D	G	D	I	I	V	K	V	N	G	R	P	L	V	D	S	S	E	L	Q	E	A	V	L	T	.	.	.	E	S	P	L
Template Known Secondary structure																												.	.	S	S								S	S	S						T			T	T							T	T					S											.	.	.		S	S
Template Predicted Secondary structure																												.	.																																														.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420				.	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	G	L	L	R	N	G	K	P	L	E	V	E	V	T	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	E	V	R	R	G	N	D	D	L	L	F	S	I	A	P	E
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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