Job Description P39099 Confidence 99.08% Date Thu Jan 5 11:58:15 GMT 2012 Rank 164 Aligned Residues 91 % Identity 29% Template c2ogpA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:partitioning-defective 3 homolog; PDBTitle: solution structure of the second pdz domain of par-3 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		T	E	P	G	T	K	V	K	L	G	L	L	R	N	G	K	P	L	E	V	E	V	T	L	D	T	S	T	S	S	S	A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	.	L	Q	K	D	D	V
Query Conservation																																																																											.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	V	G	K	R	L	N	I	Q	L	K	K	G	T	E	G	L	G	F	S	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	D	V	T	I	G	G	S	A	P	I	Y	V	K	N	I	L	P	R	G	A	A	I	Q	D	G	R	L	K	A	G	D	R
Template Known Secondary structure																S	S			S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S	S											S	S	S						T				S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																								40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		414	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.			.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.													.	.
Query SS confidence												.	.													.	.
Query Sequence		I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	.	.	P	A	I	I	A	L	Q	I	V	R	G	N	E
Query Conservation												.	.													.	.
Alig confidence												.	.													.	.
Template Conservation
Template Sequence		L	I	E	V	N	G	V	D	L	A	G	K	S	Q	E	E	V	V	S	L	L	R	S	T	K	M	E	G	T	V	S	L	L	V	F	R	Q	E	E
Template Known Secondary structure						T	T				S	S	S														S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions