Job Description P39099 Confidence 99.88% Date Thu Jan 5 11:58:15 GMT 2012 Rank 30 Aligned Residues 156 % Identity 20% Template c2ka9A_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:disks large homolog 4; PDBTitle: solution structure of psd-95 pdz12 complexed with cypin2 peptide Resolution UNK

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		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	V	Q	R	G	A	F	V	S	E	V	L	P	G	S	G	S	A	K	A	G	.	V	K	A	G	D	I	I	T	S	L	N	G	K	P	L	N	S	F	A	E	L	R	S	R	I	A	T	T	E	P	G	T	K	V	K	L	G	L	L	R	N	G	K	P	L	E	V	E	V	T	L	D	T	S	T	S	S	S
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		G	D	D	P	S	I	F	I	T	K	I	I	P	G	G	A	A	A	Q	D	G	R	L	R	V	N	D	S	I	L	F	V	N	E	V	D	V	R	E	V	T	H	S	A	A	V	E	A	L	K	E	A	G	S	I	V	R	L	Y	V	M	R	R	K	P	P	A	E	K	V	M	E	I	K	L	I	K	G	P	K
Template Known Secondary structure		S	S		S	S								T	T	S								S		T	T							T	T				S	S												T			S	S																							B	T	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																																												.																	.	.
Query SS confidence																																												.																	.	.
Query Sequence		A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	.	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A	I	I	A	L	Q
Query Conservation																																												.																	.	.
Alig confidence												.	.	.	.	.	.																											.																	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		G	L	G	F	S	I	A	G	G	V	.	.	.	.	.	.	G	N	Q	H	I	P	G	D	N	S	I	Y	V	T	K	I	I	E	G	G	A	A	H	K	D	G	R	L	Q	I	G	D	K	I	L	A	V	N	S	V	G	L	E	D	V	M	H	E	D	A	V	A	A	L	K	N	T	Y	D	V	V	Y	L	K
Template Known Secondary structure		B	S	S						S	T	.	.	.	.	.	.	T			S	B	T	T	B		S								T	T						T	T				T	T							T	T			T	T	S	S											T	S		S
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		443	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	R	G	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	K	P	S	N
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions