Job Description P39099 Confidence 82.40% Date Thu Jan 5 11:58:15 GMT 2012 Rank 377 Aligned Residues 42 % Identity 17% Template c2jsnA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:trafficking protein particle complex subunit 4; PDBTitle: solution structure of the atypical pdz-like domain of2 synbindin Resolution UNK

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		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.						.	.	.	.	430	.	.	.	.	.	.	.		.	.	440	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.													.
Query SS confidence																								.	.	.	.	.													.
Query Sequence		A	Q	A	G	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	S	I	.	.	.	.	.	A	E	M	R	K	V	L	A	A	K	P	A	.	I	I	A	L	Q	I	V	R
Query Conservation																								.	.	.	.	.													.
Alig confidence																								.	.	.	.	.													.
Template Conservation
Template Sequence		Q	R	D	G	I	R	V	G	H	A	V	L	A	I	N	G	M	D	V	N	G	R	Y	T	A	D	G	K	E	V	L	E	Y	L	G	N	P	A	N	Y	P	V	S	I	R	F	G	R
Template Known Secondary structure			S	S	S	T	T	T	T							T	T				B	T	T	B		S	S			B							S	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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