Job Description P39099 Confidence 99.20% Date Thu Jan 5 11:58:15 GMT 2012 Rank 86 Aligned Residues 77 % Identity 23% Template c2jikB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:synaptojanin-2 binding protein; PDBTitle: crystal structure of pdz domain of synaptojanin-2 binding2 protein Resolution 1.35 Å

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		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.																	.	.
Query SS confidence																																					.																	.	.
Query Sequence		P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	.	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A	I	I	A	L	Q	I	V	R	G	N	E	S
Query Conservation																																					.																	.	.
Alig confidence																																					.																	.	.
Template Conservation
Template Sequence		P	S	G	L	G	F	N	I	V	G	G	T	D	Q	Q	Y	D	S	G	I	Y	V	S	R	I	K	E	N	G	A	A	A	L	D	G	R	L	Q	E	G	D	K	I	L	S	V	N	G	Q	D	L	K	N	L	L	H	Q	D	A	V	D	L	F	R	N	A	G	Y	A	V	S	L	R	V	Q	H	R	L	E	S
Template Known Secondary structure		T	T	B	S							S	T	T	S													T	T	S										T	T							T	T				S	S												T			S										S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions