Job Description P39099 Confidence 98.37% Date Thu Jan 5 11:58:15 GMT 2012 Rank 251 Aligned Residues 175 % Identity 20% Template c2i6sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:complement c2a fragment; PDBTitle: complement component c2a Resolution 2.70 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																	.	140	.
Predicted Secondary structure																														.	.	.									.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.									.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	.	.	.	A	Q	K	I	S	I	Q	L	.	.	.	.	.	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	A
Query Conservation																														.	.	.									.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.												.	.	.									.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		P	K	S	Q	E	T	C	R	G	A	L	I	S	D	Q	.	.	W	V	L	T	A	A	H	C	F	R	D	G	N	D	H	S	L	W	R	V	N	V	G	D	P	K	S	Q	W	G	K	E	F	L	I	E	K	A	V	I	S	P	G	F	D	V	F	A	K	K	N	Q	G	I	L	E	F	Y	G	D	D	I	A
Template Known Secondary structure			T	T	S								S	S	S	S	.	.						G	G	G	G	T	T		S		G	G	G								S	S		S	S													T	T			G	G	G	G	G	G	G	T		S				T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480			.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
		142	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.	.	.																			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure										.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Query SS confidence										.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Query Sequence		L	L	Q	I	Q	N	P	S	.	.	.	.	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	.	.	.	.	.	.
Query Conservation										.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Alig confidence										.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	K	L	A	Q	K	V	K	M	S	T	H	A	R	P	I	C	L	P	C	T	M	E	A	N	L	A	L	R	R	P	Q	G	S	T	C	R	D	H	E	N	E	L	L	N	K	Q	S	V	P	A	H	F	V	A	L	N	G	S	K	L	N	I	N	L	K	M	G	V	E	W	T	S	C	A	E	V	V	S
Template Known Secondary structure						S	S					S	S	S					B		T	T	B							T	T			T	T											S		S	S									T	T		S																	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
													194	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.													.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																				.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																				.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	L	N	L	E	G	L	E	N	F	I	Q	T	.	.	.	.	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	E	.	.	.	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	.	.	.	.	.	.	.	.	.	.	.	.	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																				.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																				.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	E	K	T	M	F	P	N	L	T	D	V	R	E	V	V	T	D	Q	F	L	C	S	G	T	Q	E	D	E	S	P	C	K	G	E	S	G	G	A	V	F	L	E	R	R	F	R	F	F	Q	V	G	L	V	S	W	G	L	Y	N	P	C	L	G	S	A	D	K	R	A	P	R	S	K	V	P	P	P	R	D
Template Known Secondary structure		G			S	S		T	T				G	G	G	T			T	T							T	T						G	G	G	T	T								T	T												S			T	T	T	T									S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	H	I	N	L	F	R	M	Q	P	W	L	R	Q	H	L	G	D	V
Template Known Secondary structure						G	G	G	G									T	T	T
Template Predicted Secondary structure
Template SS confidence
		708	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions