Job Description P39099 Confidence 99.11% Date Thu Jan 5 11:58:15 GMT 2012 Rank 139 Aligned Residues 76 % Identity 25% Template c2i04B_ PDB info PDB header:peptide binding protein Chain: B: PDB Molecule:membrane-associated guanylate kinase, ww and pdz PDBTitle: x-ray crystal structure of magi-1 pdz1 bound to the c-2 terminal peptide of hpv18 e6 Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.			.	.	440	.	.	.	.
Predicted Secondary structure																																								.																	.	.															.	.
Query SS confidence																																								.																	.	.															.	.
Query Sequence		M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	.	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A	.	.	I	I	A	L	Q	I	V
Query Conservation																																								.																	.	.															.	.
Alig confidence																																								.																	.	.															.	.
Template Conservation
Template Sequence		K	L	R	K	S	S	R	G	F	G	F	T	V	V	G	G	D	E	P	D	E	F	L	Q	I	K	S	L	V	L	D	G	P	A	A	L	D	G	K	M	E	T	G	D	V	I	V	S	V	N	D	T	C	V	L	G	H	T	H	A	Q	V	V	K	I	F	Q	S	I	P	I	G	A	S	V	D	L	E	L	C
Template Known Secondary structure						B	T	T	B	S	S							S	S	T	T	S									T	T	S										T	T							T	T				T	T												T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
		445
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		534

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions