Job Description P39099 Confidence 99.14% Date Thu Jan 5 11:58:15 GMT 2012 Rank 122 Aligned Residues 83 % Identity 19% Template c2gzvA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:prkca-binding protein; PDBTitle: the cystal structure of the pdz domain of human pick1 (casp target) Resolution 1.12 Å

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure																																													.																	.	.
Query SS confidence																																													.																	.	.
Query Sequence		S	A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	.	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A	I	I	A	L
Query Conservation																																													.																	.	.
Alig confidence																									.	.																			.																	.	.
Template Conservation																									.	.
Template Sequence		P	G	K	V	T	L	Q	K	D	A	Q	N	L	I	G	I	S	I	G	G	G	A	Q	.	.	P	C	L	Y	I	V	Q	V	F	D	N	T	P	A	A	L	D	G	T	V	A	A	G	D	E	I	T	G	V	N	G	R	S	I	K	G	K	T	K	V	E	V	A	K	M	I	Q	E	V	K	G	E	V	T	I
Template Known Secondary structure											T	T	S			S									.	.										T	T	S										T	T							T	T				T	T															S
Template Predicted Secondary structure																									.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		442	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	V	R	G	N	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Y	N	K	L	Q	Y	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions