Job Description P39099 Confidence 99.09% Date Thu Jan 5 11:58:15 GMT 2012 Rank 154 Aligned Residues 94 % Identity 21% Template c2d90A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:pdz domain containing protein 1; PDBTitle: solution structure of the third pdz domain of pdz domain2 containing protein 1 Resolution UNK

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		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		S	T	S	S	S	A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A	I
Query Conservation																																																																	.	.
Alig confidence																													.																																				.	.
Template Conservation																													.
Template Sequence		S	S	G	S	S	G	R	V	V	V	I	K	K	G	S	N	G	Y	G	F	Y	L	R	A	G	P	E	.	Q	K	G	Q	I	I	K	D	I	E	P	G	S	P	A	E	A	A	G	L	K	N	N	D	L	V	V	A	V	N	G	K	S	V	E	A	L	D	H	D	G	V	V	E	M	I	R	K	G	G	D	Q
Template Known Secondary structure			S		S	S	S									S	S	S	S	S							S	S	.	S	S	S								T	T	S	T	T	T	T	T	T			T	T							S	S		B		T	T	S												S	T	T
Template Predicted Secondary structure																													.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	Q	I	V	R	G	N	E	S	I	Y	L	L	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	L	L	V	L	D	K	E	A	E	S	I	Y	S	L	S
Template Known Secondary structure								S	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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