Job Description P39099 Confidence 99.93% Date Thu Jan 5 11:58:15 GMT 2012 Rank 22 Aligned Residues 166 % Identity 14% Template c1zyoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:serine protease; PDBTitle: crystal structure of the serine protease domain of sesbania mosaic2 virus polyprotein Resolution 2.40 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	P	A	V	V	S	V	R	V	E	G	T	A	S	Q	G	Q	K	I	P	E	E	F	K	K	F	F	G	D	D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	N	D	G	R	E	F
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		D	E	P	A	S	L	V	A	I	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	T	T	I	G	F	G	C	R	T	K	.	I	E	D	C	L	L	T	A	H	H	V	W	C	N	S	M	R	P	T	G	L	A	K	A	G	K	Q	V
Template Known Secondary structure			S		S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T											.													T	S	S	S								T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.																													.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
							128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure		.	.	.	.	.																						.
Query SS confidence		.	.	.	.	.																						.
Query Sequence		.	.	.	.	.	D	A	K	L	I	G	S	D	D	Q	S	D	I	A	L	L	Q	I	Q	N	P	.	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N
Query Conservation		.	.	.	.	.																						.
Alig confidence		.	.	.	.	.																						.																																															.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		S	V	E	D	W	E	I	S	M	S	S	S	D	K	M	L	D	F	A	I	V	R	V	P	T	H	V	W	S	K	L	G	V	K	S	T	P	L	V	C	P	S	S	K	D	V	I	T	C	Y	G	G	S	S	S	D	C	L	M	S	G	V	G	S	S	S	T	S	E	F	T	W	K	.	.	.	.	.	.	.
Template Known Secondary structure					S										T	T	T																T						B					S										S	S	T	T	S												S	S	T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	Q	T	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A
Query Conservation
Alig confidence		.																			.																	.	.	.	.
Template Conservation		.																			.																	.	.	.	.
Template Sequence		.	L	T	H	T	C	P	T	A	A	G	W	S	G	T	P	L	Y	S	.	S	R	G	V	V	G	M	H	V	G	F	E	E	I	G	K	.	.	.	.	L	N	R	G	V	N	M	F	Y	V	A	N	Y	L
Template Known Secondary structure		.									T	T		T	T						.	S	S												T	T	T	.	.	.	.														T
Template Predicted Secondary structure		.																			.																	.	.	.	.
Template SS confidence
			273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.					.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions