Job Description P39099 Confidence 99.53% Date Thu Jan 5 11:58:15 GMT 2012 Rank 57 Aligned Residues 145 % Identity 15% Template c1z87A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:alpha-1-syntrophin; PDBTitle: solution structure of the split ph-pdz supramodule of alpha-2 syntrophin Resolution UNK

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		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.																	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	A	G	V	K	A	G	D	I	I	T	S	L	N	G	K	P	L	N	S	F	A	E	L	R	S	R	I	A	T	T	E	P	G	T	K	V	K	L	G	L	L	R	N	G	K	P	L	E	V	E	V	T	L	D	T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	A	S
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	G	R	R	A	P	R	T	G	L	L	E	L	R	C	G	A	G	S	G	A	G	G	E	R	W	Q	R	V	L	L	S	L	A	E	D	A	L	T	V	S	P	A	D	G	E	P	G	P	E	P	E	P	A	Q	L	N	G	A	A	E	P	G	A	A	P	P	Q	L	P	E	A	L	L	L	Q	R	R	R
Template Known Secondary structure					S													S	T	T	S			S	S												S	S										S			S		S	S					S		S		S	S	S	S	S		S					T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure																																										.																	.	.
Query SS confidence																																										.																	.	.
Query Sequence		A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	.	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A	I	I	A	L	Q	I	V
Query Conservation																																										.																	.	.
Alig confidence																																										.																	.	.
Template Conservation
Template Sequence		V	T	V	R	K	A	D	A	G	G	L	G	I	S	I	K	G	G	R	E	N	K	M	P	I	L	I	S	K	I	F	K	G	L	A	A	D	Q	T	E	A	L	F	V	G	D	A	I	L	S	V	N	G	E	D	L	S	S	A	T	H	D	E	A	V	Q	A	L	K	K	T	G	K	E	V	V	L	E	V	K
Template Known Secondary structure						T	T	T	T											T	T	T	T										T	T	S						T	T			S	S							S	S		B		T	T	S														S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		445	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	M	K	E
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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