Job Description P39099 Confidence 97.56% Date Thu Jan 5 11:58:15 GMT 2012 Rank 277 Aligned Residues 170 % Identity 15% Template c1z71A_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:thrombin; PDBTitle: thrombin and p2 pyridine n-oxide inhibitor complex structure Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.									.	.	.	.	.	120	.	.	.	.											.	.	.	.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	.	.	.	.	.	.	.	.	Q	K	I	S	I	Q	L	N	D	G	.	.	.	.	.	.	.	.	.	.	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	.	.	.	.	.	.	.	.	D	I	A	L	L	Q
Query Conservation																										.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence												.	.													.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		L	C	G	A	S	L	I	S	D	R	.	.	W	V	L	T	A	A	H	C	L	L	Y	P	P	W	D	K	N	F	T	E	N	D	L	L	V	R	I	G	K	H	S	R	T	R	Y	E	R	N	I	E	K	I	S	M	L	E	K	I	Y	I	H	P	R	Y	N	W	R	E	N	L	D	R	D	I	A	L	M	K
Template Known Secondary structure									S	S	S	.	.						G	G	G	T			G	G	G	T					G	G	G						S			B	S	S	S			T	T	T													T	T		B	T	T	T	T		B	T
Template Predicted Secondary structure												.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		145	.	.	.								.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.																																.	.	.	.	.	.																													.	.	.	.
Query SS confidence						.	.	.	.	.	.	.																																.	.	.	.	.	.																													.	.	.	.
Query Sequence		I	Q	N	P	.	.	.	.	.	.	.	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	.	.	.	.	.	.	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	.	.	.	.
Query Conservation						.	.	.	.	.	.	.																																.	.	.	.	.	.																													.	.	.	.
Alig confidence						.	.	.	.	.	.	.																																.	.	.	.	.	.																													.	.	.	.
Template Conservation
Template Sequence		L	K	K	P	V	A	F	S	D	Y	I	H	P	V	C	L	P	D	R	E	T	A	A	S	L	L	Q	A	G	Y	K	G	R	V	T	G	W	G	N	L	K	E	G	Q	P	S	V	L	Q	V	V	N	L	P	I	V	E	R	P	V	C	K	D	S	T	R	I	R	I	T	D	N	M	F	C	A	G	Y	K	P
Template Known Secondary structure			S	S					B	T	T	B				B													T	T								S			S						S	B								B									T		S	S				T	T								G
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
								208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.						.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure		.	.	.	.	.	.																	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	.	.	.	.	.	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D	F	G
Query Conservation		.	.	.	.	.	.																	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																	.	.	.	.	.
Template Conservation
Template Sequence		D	E	G	K	R	G	D	A	C	E	G	D	S	G	G	P	F	V	M	K	S	P	F	N	N	R	W	Y	Q	M	G	I	V	S	W	G	E	G	C	D	R	D	G	K	Y	G	F	Y	T	H	V	F	R	L	K	K	W	I	Q	K	V	I	D	Q	F	G
Template Known Secondary structure		G	G					B			T	T		T	T								T	T	T													S	S	S	S		T	T								T	G	G	G
Template Predicted Secondary structure
Template SS confidence

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions