Job Description P39099 Confidence 77.27% Date Thu Jan 5 11:58:15 GMT 2012 Rank 388 Aligned Residues 167 % Identity 17% Template c1ym0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:fibrinotic enzyme component b; PDBTitle: crystal structure of earthworm fibrinolytic enzyme component b: a2 novel, glycosylated two-chained trypsin Resolution 2.06 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.												.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.												.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.												.	.	.
Query Sequence		L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	.	.	.	.	.	.	.	.	.	.	.	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	.	.	.	.	.	.	.	D	I	A	L	L	Q	I	Q	N	P	S	.	.	.
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.												.	.	.
Alig confidence												.	.																				.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.												.	.	.
Template Conservation												.	.
Template Sequence		F	C	G	G	S	I	I	N	D	R	.	.	W	V	V	C	A	A	H	C	M	Q	G	E	A	P	A	L	V	S	L	V	V	G	E	H	D	S	S	A	A	S	T	V	R	Q	T	H	D	V	D	S	I	F	V	N	E	N	Y	D	P	A	T	L	E	N	D	V	S	V	I	K	T	A	V	A	I	T	F	D
Template Known Secondary structure										T	T	.	.										T	T			G	G	G						S		S	B	T	T	S			S	S													T	T			T	T	T		T	T								S	S					S
Template Predicted Secondary structure												.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190												.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.								.	.	210
Predicted Secondary structure		.																																										.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query SS confidence		.																																										.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query Sequence		.	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	.	.	.	.	.	.	.	.	.	.	.	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	.	.	.	.	.	.	.	S	I	N
Query Conservation		.																																										.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Alig confidence		.																																										.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	V	G	P	I	C	A	P	D	P	A	N	D	Y	V	Y	R	K	S	Q	C	S	G	W	G	T	I	N	S	G	G	V	C	C	P	A	V	L	R	Y	V	T	L	N	I	T	T	N	A	F	C	D	A	V	Y	T	S	D	T	I	Y	D	D	M	I	C	A	T	D	N	T	G	M	T	D	R	D	S	C
Template Known Secondary structure		S	S					B				T	T				T	T								S			S	S	T	T			S			S	B																			T	T	S				T	T							S	S		S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		R	G	N	S	G	G	A	L	L	N	L	N	G	E	.	.	.	.	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D	F
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																			.	.
Template Conservation																																						.	.
Template Sequence		Q	G	D	S	G	G	P	L	S	V	K	D	G	S	G	I	F	S	L	V	G	I	V	S	W	G	I	G	C	A	S	G	Y	P	G	V	.	.	Y	S	R	V	G	F	H	A	G	W	I	T	D	T	I	T	N
Template Known Secondary structure		T	T	T	T	T								T	T													S	S	S	S	S	S	S				.	.
Template Predicted Secondary structure																																						.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions