Job Description P39099 Confidence 98.91% Date Thu Jan 5 11:58:15 GMT 2012 Rank 230 Aligned Residues 79 % Identity 19% Template c1y7nA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding family PDBTitle: solution structure of the second pdz domain of the human2 neuronal adaptor x11alpha Resolution UNK

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		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		D	T	S	T	S	S	S	A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P
Query Conservation																																																																			.	.
Alig confidence																													.	.	.	.	.	.	.																																.	.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		E	T	M	G	N	V	T	T	V	L	I	R	R	P	D	L	R	Y	Q	L	G	F	S	V	Q	N	G	.	.	.	.	.	.	.	I	I	C	S	L	M	R	G	G	I	A	E	R	G	G	V	R	V	G	H	R	I	I	E	I	N	G	Q	S	V	V	A	T	P	H	E	K	I	V	H	I	L	S	N	A	V
Template Known Secondary structure					S	S									S	S	T	T	S								T	T	.	.	.	.	.	.	.							T	T	S						T			S	S							T	T				T	T	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		437	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	I	A	L	Q	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	I	H	M	K	T	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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