Job Description P39099 Confidence 99.81% Date Thu Jan 5 11:58:15 GMT 2012 Rank 35 Aligned Residues 150 % Identity 23% Template c1w9qB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the pdz tandem of human syntenin in2 complex with tnefaf peptide Resolution 1.7 Å

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		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	K	R	G	L	L	G	I	K	G	T	E	M	S	A	D	I	A	K	A	F	N	L	D	V	Q	R	G	A	F	V	S	E	V	L	P	G	S	G	S	A	K	A	G	V	K	A	G	D	I	I	T	S	L	N	G	K	P	L	N	S	F	A	E	L	R	S	R	I	A	T	T	E	P	G	T	K	V	K
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	Q	D	G	K	I	G	L	R	L	K	S	.	.	.	.	.	.	.	.	.	.	.	.	I	D	N	G	I	F	V	Q	L	V	Q	A	N	S	P	A	S	L	V	G	L	R	F	G	D	Q	V	L	Q	I	N	G	E	N	C	A	G	W	S	S	D	K	A	H	K	V	L	K	Q	A	F	G	E	K	I
Template Known Secondary structure				T	T	S									.	.	.	.	.	.	.	.	.	.	.	.		T	T									T	T	S					T	T			T	T							T	T				T	T														S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.													.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	L	R	N	G	K	P	L	E	V	E	V	T	L	D	T	S	T	S	S	S	A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	M	T	I	R	D	R	P	F	E	R	T	I	T	M	H	K	D	S	T	G	H	V	G	F	I	F	K	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	T	S	I	V	K	D	S	S	A	A	R	N	G	L	L	T	E	H	N	I	C	E	I	N	G	Q	N	V
Template Known Secondary structure									T	T										T	T	S			S					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S					T	T			S	S							T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		423			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A	I	I	A	L	Q	I	V
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		I	G	L	K	D	S	Q	I	A	D	I	L	S	T	S	G	T	V	V	T	I	T	I	M
Template Known Secondary structure		T	T												T	S		S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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