Job Description P39099 Confidence 96.52% Date Thu Jan 5 11:58:15 GMT 2012 Rank 307 Aligned Residues 185 % Identity 17% Template c1w0zU_ PDB info PDB header:hydrolase Chain: U: PDB Molecule:urokinase-type plasminogen activator; PDBTitle: urokinase type plasminogen activator Resolution 1.9 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.													.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	V	V	S	V	R	V	E	G	T	A	S	Q	G	Q	K	I	P	E	E	F	K	K	F	F	G	D	D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	Q	K	I	S
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		P	W	F	A	A	I	Y	R	R	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S	V	T	Y	V	C	G	G	S	L	I	S	P	C	.	.	W	V	I	S	A	T	H	C	F	I	D	Y	P	K	K	E	D	Y	I	V	Y	L	G	R	S	R	L	N
Template Known Secondary structure		T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S													T	T	.	.						G	G	G	T	T	T				G	G	G						S			B	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.																								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.										.	.	.	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		I	Q	L	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	.	.	.	.	.	.	.	.	.	Q	S	D	I	A	L	L	Q	I	Q	N	P	S	K	.	.	.	.	.	.	.	.	.	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	.	.	.
Query Conservation																				.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		S	N	T	Q	G	E	M	K	F	E	V	E	N	L	I	L	H	K	D	Y	S	A	D	T	L	A	H	H	N	D	I	A	L	L	K	I	R	S	K	E	G	R	C	A	Q	P	S	R	T	I	Q	T	I	S	L	P	S	M	Y	N	D	P	Q	F	G	T	S	C	E	I	T	G	F	G	K	E	N	S	T	D
Template Known Secondary structure		S			T	T													T	T					S	S				S										T	T	S							S	S					B				T	T					T	T								S			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
								178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.									210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.	.	.	.	.	.																																	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence		.	.	.	.	.	.																																	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		.	.	.	.	.	.	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	.	.	.	.	.	.	.	.	N	R	G	N	S	G	G	A	L	L	N	L	N	G	.	.	.	E	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V
Query Conservation		.	.	.	.	.	.																																	.	.	.	.	.	.	.	.															.	.	.
Alig confidence		.	.	.	.	.	.																																	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		Y	L	Y	P	E	Q	L	K	M	T	V	V	K	L	I	S	H	R	E	C	Q	Q	P	H	Y	Y	G	S	E	V	T	T	K	M	L	C	A	A	D	P	Q	W	K	T	D	S	C	Q	G	D	S	G	G	P	L	V	C	S	L	Q	G	R	M	T	L	T	G	I	V	S	W	G	R	G	C	A	L	K	D	K
Template Known Secondary structure		S	S			S	B															T	S	T	T	T	T	G	G	G	S		T	T							T	T	S			B			T	T		T	T								T	T												S	S	S	S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	V	Y	T	R	V	S	H	F	L	P	W	I	R	S	H	T	K	E
Template Known Secondary structure								G	G	G
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions