Job Description P39099 Confidence 98.97% Date Thu Jan 5 11:58:15 GMT 2012 Rank 210 Aligned Residues 77 % Identity 21% Template c1r6jA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:syntenin 1; PDBTitle: ultrahigh resolution crystal structure of syntenin pdz2 Resolution 0.73 Å

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		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		D	T	S	T	S	S	S	A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P
Query Conservation																																																																			.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation																								.	.	.	.	.	.	.	.	.
Template Sequence		G	A	M	D	P	R	T	I	T	M	H	K	D	S	T	G	H	V	G	F	I	F	.	.	.	.	.	.	.	.	.	K	N	G	K	I	T	S	I	V	K	D	S	S	A	A	R	N	G	L	L	T	E	H	N	I	C	E	I	N	G	Q	N	V	I	G	L	K	D	S	Q	I	A	D	I	L	S	T	S	G
Template Known Secondary structure			T	T											T	T	S							.	.	.	.	.	.	.	.	.		T	T							T	T	S						T			S	S							T	T				T	T													S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.										.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		437	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	I	A	L	Q	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	V	T	I	T	I	M
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions