Job Description P39099 Confidence 96.93% Date Thu Jan 5 11:58:15 GMT 2012 Rank 298 Aligned Residues 181 % Identity 19% Template c1q3xA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:mannan-binding lectin serine protease 2; PDBTitle: crystal structure of the catalytic region of human masp-2 Resolution 2.23 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.								.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.												.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.												.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		D	D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	.	.	.	.	N	Q	A	Q	K	I	S	I	Q	L	N	.	.	.	.	.	.	.	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	.	.	.	.	.	.	.	.
Query Conservation																																				.	.	.	.												.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence																									.	.										.	.	.	.												.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																									.	.
Template Sequence		G	D	F	P	W	Q	V	L	I	L	G	G	T	T	A	A	G	A	L	L	Y	D	N	.	.	W	V	L	T	A	A	H	A	V	Y	E	Q	K	H	D	A	S	A	L	D	I	R	M	G	T	L	K	R	L	S	P	H	Y	T	Q	A	W	S	E	A	V	F	I	H	E	G	Y	T	H	D	A	G	F	D	N
Template Known Secondary structure		T	S	S	T	T						S	S	S	S							T	T	T	.	.														T	T	T								S		S	B	T	T		S		S												T	T			T	T	S			T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.			.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
		139	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190										.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																															.	.	.	.													.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.																															.	.	.	.													.	.	.	.	.	.	.	.	.
Query Sequence		D	I	A	L	L	Q	I	Q	N	P	.	.	.	.	.	.	.	S	K	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	.	.	.	.	Q	T	A	T	S	G	I	V	S	A	L	G	.	.	.	.	.	.	.	.	.	R	S	G	L	N	L	E	G
Query Conservation												.	.	.	.	.	.	.																															.	.	.	.													.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																															.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	A	L	I	K	L	N	N	K	V	V	I	N	S	N	I	T	P	I	C	L	P	R	K	E	A	E	S	F	M	R	T	D	D	I	G	T	A	S	G	W	G	L	T	Q	R	G	F	L	A	R	N	L	M	Y	V	D	I	P	I	V	D	H	Q	K	C	T	A	A	Y	E	K	P	P	Y	P	R	G	S
Template Known Secondary structure									S	S					B	T	T	B				B				G	G	G	G	G	G	S	S	T	T								S	S			T	T	S	S			S	B																		T	S	S	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
		199	200	.	.	.	.	.	.	.							.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure											.	.	.	.	.	.																		.	.	.	.	.
Query SS confidence											.	.	.	.	.	.																		.	.	.	.	.
Query Sequence		L	E	N	F	I	Q	T	D	A	.	.	.	.	.	.	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	E	.	.	.	.	.	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D
Query Conservation											.	.	.	.	.	.																		.	.	.	.	.
Alig confidence											.	.	.	.	.	.																		.	.	.	.	.
Template Conservation
Template Sequence		V	T	A	N	M	L	C	A	G	L	E	S	G	G	K	D	S	C	R	G	D	S	G	G	A	L	V	F	L	D	S	E	T	E	R	W	F	V	G	G	I	V	S	W	G	S	M	N	C	G	E	A	G	Q	Y	G	V	Y	T	K	V	I	N	Y	I	P	W	I	E	N	I	I	S
Template Known Secondary structure		S		T	T							S	S			S	B			T	T		T	T								T	T	T	T													S	S	T	T		T	T								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions