Job Description P39099 Confidence 98.92% Date Thu Jan 5 11:58:15 GMT 2012 Rank 225 Aligned Residues 72 % Identity 25% Template c1obyA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the complex of pdz2 of syntenin with2 a syndecan-4 peptide. Resolution 1.85 Å

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		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		S	A	S	A	E	M	I	T	P	A	L	E	G	A	T	L	S	D	G	Q	L	K	D	G	G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	L	Q	K	D	D	V	I	I	G	V	N	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A	I	I	A	L	Q
Query Conservation																																																													.	.
Alig confidence																							.	.	.	.	.	.	.																																.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		P	R	T	I	T	M	H	K	D	S	T	G	H	V	G	F	I	F	K	N	G	.	.	.	.	.	.	.	K	I	T	S	I	V	K	D	S	S	A	A	R	N	G	L	L	T	E	H	N	I	C	E	I	N	G	Q	N	V	I	G	L	K	D	S	Q	I	A	D	I	L	S	T	S	G	T	V	V	T	I	T
Template Known Secondary structure											T	T	S			S					T	T	.	.	.	.	.	.	.							T	T	S						T			T	T		B					T	T				T	T													S		S
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.								.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		443
Predicted Secondary structure
Query SS confidence
Query Sequence		I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		269

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions