Job Description P39099 Confidence 98.04% Date Thu Jan 5 11:58:15 GMT 2012 Rank 267 Aligned Residues 178 % Identity 17% Template c1md7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:c1r complement serine protease; PDBTitle: monomeric structure of the zymogen of complement protease2 c1r Resolution 3.20 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		D	D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	N	D	G	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	A	K	L	I	G	S	D	D	Q	S	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence																									.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation																									.	.
Template Sequence		G	N	F	P	W	Q	V	F	T	N	I	H	G	R	G	G	G	A	L	L	G	D	R	.	.	W	I	L	T	A	A	H	T	L	Y	P	K	E	H	E	A	Q	S	N	A	S	L	D	V	F	L	G	H	T	N	V	E	E	L	M	K	L	G	N	H	P	I	R	R	V	S	V	H	P	D	Y	R	Q	D	E
Template Known Secondary structure		T	S	S	T	T						S	S	S								T	T	T	.	.						G	G	G	G	S			T	T	S												S		S	B																			T	T			S	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.			.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
								139	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.													.	.	.	.	.																																																								.	.
Query SS confidence		.	.	.	.	.	.													.	.	.	.	.																																																								.	.
Query Sequence		.	.	.	.	.	.	D	I	A	L	L	Q	I	Q	N	P	S	K	.	.	.	.	.	L	T	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	.	.
Query Conservation		.	.	.	.	.	.													.	.	.	.	.																																																								.	.
Alig confidence		.	.	.	.	.	.													.	.	.	.	.																																																								.	.
Template Conservation
Template Sequence		S	Y	N	F	E	G	D	I	A	L	L	E	L	E	N	S	V	T	L	G	P	N	L	L	P	I	C	L	P	D	N	D	T	F	Y	D	L	G	L	M	G	Y	V	S	G	F	G	A	H	D	L	R	F	V	R	L	P	V	A	N	P	Q	A	C	E	N	W	L	D	V	F	S	Q	N	M	F	C	A	G	H
Template Known Secondary structure		S				S									S	S						S	S	S				B					G	G	G	S		T	T												B								B			T	T	T	S		T	T				T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
					206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure		.	.	.																				.	.	.	.	.
Query SS confidence		.	.	.																				.	.	.	.	.
Query Sequence		.	.	.	D	A	S	I	N	R	G	N	S	G	G	A	L	L	N	L	N	G	E	.	.	.	.	.	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D
Query Conservation		.	.	.																				.	.	.	.	.
Alig confidence		.	.	.																				.	.	.	.	.															.	.	.
Template Conservation																																											.	.	.
Template Sequence		P	S	L	K	Q	D	A	C	Q	G	D	A	G	G	V	F	A	V	R	D	P	N	T	D	R	W	V	A	T	G	I	V	S	W	G	I	G	C	S	R	G	.	.	.	Y	G	F	Y	T	K	V	L	N	Y	V	D	W	I	K	K	E	M	E
Template Known Secondary structure		T	T	T	G	G	G	G	G				S	S								T	T	T	T										S					S	S	S	.	.	.							G	G	G	G
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		626	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.				.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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