Job Description P39099 Confidence 97.62% Date Thu Jan 5 11:58:15 GMT 2012 Rank 274 Aligned Residues 176 % Identity 19% Template c1gpzB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:complement c1r component; PDBTitle: the crystal structure of the zymogen catalytic domain of2 complement protease c1r Resolution 2.9 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.														.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query Sequence		D	L	P	D	Q	P	A	Q	P	F	E	G	L	G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	.	.	.	.	.	.	.
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Alig confidence																								.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		N	F	P	W	Q	V	F	T	N	I	H	G	R	G	G	G	A	L	L	G	D	R	.	.	W	I	L	T	A	A	H	T	L	Y	P	K	E	H	Q	S	N	A	S	L	D	V	F	L	G	H	T	N	V	E	E	L	M	K	L	G	N	H	P	I	R	R	V	S	V	H	P	D	Y	R	Q	D	E	S	Y	N
Template Known Secondary structure		T	S	T	T						S	S	S								T	T	T	.	.						G	G	G	T	S		S					S								S		S	S							T												T	T			S	S		S	S
Template Predicted Secondary structure																								.	.
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.			.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
					139	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure		.	.	.															.	.	.	.	.
Query SS confidence		.	.	.															.	.	.	.	.
Query Sequence		.	.	.	D	I	A	L	L	Q	I	Q	N	P	S	K	L	T	.	.	.	.	.	Q	I	A	I	A	D	S	D	K	L	R	V	G	D	F	A	V	A	V	G	N	P	F	G	L	G	Q	T	A	T	S	G	I	V	S	A	L	G	R	S	G	L	N	L	E	G	L	E	N	F	I	Q	T	D	A	S	I	N
Query Conservation		.	.	.															.	.	.	.	.
Alig confidence		.	.	.															.	.	.	.	.																																						.
Template Conservation																																																													.
Template Sequence		F	E	G	D	I	A	L	L	E	L	E	N	S	V	T	L	G	P	N	L	L	P	I	C	L	P	D	N	D	T	F	Y	D	L	G	L	M	G	Y	V	S	G	F	G	I	A	H	D	L	R	F	V	R	L	P	V	A	N	P	.	Q	A	C	E	Q	N	M	F	C	A	G	H	P	S	L	K	Q	D	A	C
Template Known Secondary structure			T	T								S	S					B	T	T	B				B				S	S	S				T	T													S											G	.	G	G	T										G	G	G	T	T	G	G	G
Template Predicted Secondary structure																																																													.
Template SS confidence
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.		.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		R	G	N	S	G	G	A	L	L	N	L	N	G	E	.	.	.	.	.	L	I	G	I	N	T	A	I	L	A	P	G	G	G	S	V	G	I	G	F	A	I	P	S	N	M	A	R	T	L	A	Q	Q	L	I	D
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.															.	.	.
Template Conservation																																			.	.	.
Template Sequence		Q	G	D	S	G	G	V	F	A	V	R	D	P	N	T	D	R	W	V	A	T	G	I	V	S	W	G	I	G	C	S	R	G	.	.	.	Y	G	F	Y	T	K	V	L	N	Y	V	D	W	I	K	K	E	M	E
Template Known Secondary structure		G	S		S	S								T	T	T													T	T	T	T	T	T	.	.	.							G	G	G	G								T
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.				.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions