Job Description P39099 Confidence 94.45% Date Thu Jan 5 11:58:15 GMT 2012 Rank 332 Aligned Residues 80 % Identity 23% Template c1bhxB_ PDB info PDB header:serine protease Chain: B: PDB Molecule:alpha thrombin; PDBTitle: x-ray structure of the complex of human alpha thrombin with the2 inhibitor sdz 229-357 Resolution 2.30 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.																			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		G	S	G	V	I	I	N	A	S	K	G	Y	V	L	T	N	N	H	V	I	N	Q	A	Q	K	I	S	I	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	G	R	E	F	D	A	K	L	I	G	S	D	D	Q	S	.	.	.	.	.	.	.	.	D	I	A	L	L	Q	I
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence											.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation											.	.
Template Sequence		C	G	A	S	L	I	S	D	R	.	.	W	V	L	T	A	A	H	C	L	L	Y	P	P	W	D	K	N	F	T	E	N	D	L	L	V	R	I	G	K	H	S	R	T	R	Y	E	R	N	I	E	K	I	S	M	L	E	K	I	Y	I	H	P	R	Y	N	W	R	E	N	L	D	R	D	I	A	L	M	K	L
Template Known Secondary structure								S	S	S	.	.						G	G	G	T			G	G	G	T					G	G	G						S				S	S				T	T	T													T	T		B	T	T	T	T		B	T
Template Predicted Secondary structure											.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		146	.	.					.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure					.	.	.	.													.	.	.	.
Query SS confidence					.	.	.	.													.	.	.	.
Query Sequence		Q	N	P	.	.	.	.	S	K	L	T	Q	I	A	I	A	D	S	D	.	.	.	.	K	L	R	V	G	D	F	A	V	A	V	G	N
Query Conservation					.	.	.	.													.	.	.	.
Alig confidence					.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		K	K	P	V	A	F	S	D	Y	I	H	P	V	C	L	P	D	R	E	T	A	A	S	L	L	Q	A	G	Y	K	G	R	V	T	G	W
Template Known Secondary structure		S	S						S	S																		T	T								S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions