Job Description Q46927 Confidence 96.95% Date Thu Jan 5 12:35:56 GMT 2012 Rank 90 Aligned Residues 79 % Identity 18% Template c8ldhA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:m4 apo-lactate dehydrogenase; PDBTitle: refined crystal structure of dogfish m4 apo-lactate2 dehydrogenase Resolution 2.80 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		A	D	A	H	I	C	V	V	G	I	G	G	V	G	S	W	A	A	E	A	L	A	R	T	G	I	.	G	A	I	T	L	I	D	M	D	D	V	C	V	T	N	T	N	R	Q	I	H	A	L	R	D	N	V	G	L	A	K	A	E	V	M	A	E	R	I	R	Q	I	N	P	E	C	R	V	T	V	V	D	D
Query Conservation																												.
Alig confidence																												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	N	K	I	T	V	V	G	V	G	A	V	G	M	A	C	A	I	S	I	L	M	K	D	L	A	D	E	V	A	L	V	D	V	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	L	K	G	E	M	M	D	L	Q	H	G	S	L	F	L	H	T	A	K	I	V	S
Template Known Secondary structure			S	S								S												T	T	T			S							S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	G	G	G
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	T	P	D	N	V	A	Q	Y	M	S	V	G	Y	S	Y	V	I	D	A	I	D	S
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		G	K	D	Y	S	V	S	.	.	.	.	.	A	G	S	K	L	V	V	I	T	A	G	A
Template Known Secondary structure			S	S	G	G	G	G	.	.	.	.	.	T	T		S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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