Job Description Q46927 Confidence 100.00% Date Thu Jan 5 12:35:56 GMT 2012 Rank 10 Aligned Residues 225 % Identity 17% Template c3vh3A_ PDB info PDB header:metal binding protein/protein transport Chain: A: PDB Molecule:ubiquitin-like modifier-activating enzyme atg7; PDBTitle: crystal structure of atg7ctd-atg8 complex Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		V	V	I	S	D	A	W	R	Q	R	F	G	G	T	A	.	.	R	L	Y	G	E	K	A	L	Q	L	F	A	D	A	H	I	C	V	V	G	I	G	G	V	G	S	W	A	A	E	A	L	A	R	T	G	I	G	A	I	T	L	I	D	M	D	D	V	C	V	T	N	T	N	R	Q	I	H	A	L	R	D	N
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		L	K	I	A	D	Q	S	V	D	L	N	L	K	L	M	K	W	R	I	L	P	D	L	N	L	D	I	I	K	N	T	K	V	L	L	L	G	A	G	T	L	G	C	Y	V	S	R	A	L	I	A	W	G	V	R	K	I	T	F	V	D	N	G	T	V	S	Y	S	N	P	V	R	Q	A	L	Y	N	F	E	D
Template Known Secondary structure																				T		T	T								T									S													T	T											B			T	T	S	T	T	T	S	T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	G	L	A	K	A	E	V	M	A	E	R	I	R	Q	I	N	P	E	C	R	V	T	V	V	D	D	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	D	N	V	A	Q	Y	M	S	V	G	Y	S	Y	V	I	D	A	I	D	S	V	R	P	K	A	A	L	I	A	Y	C	R	R	N
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																							.
Template Sequence		C	G	K	P	K	A	E	L	A	A	A	S	L	K	R	I	F	P	L	M	D	A	T	G	V	K	L	S	I	P	M	I	G	H	K	L	V	N	E	E	A	Q	H	K	D	F	D	R	L	R	A	L	I	.	K	E	H	D	I	I	F	L	L	V	D	S	R	E	S	R	W	L	P	S	L	L	S	N	I	E
Template Known Secondary structure		T	T	S	B														T	T													T	T	S			S																	.				S							S	S	T	G	G	G										T
Template Predicted Secondary structure																																																							.
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.		.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	P	L	V	T	T	G	G	A	G	G	Q	I	D	P	T	Q	I	Q	V	T	D	L	A	K	T	I	Q	D	P	L	A	A	K	L	R	E	R	L	K	S	D	F	G	V	V	K	N	S	K	G	K	L	G	V	D	C	V	F	S	T	E	A	L	V	Y	P	Q	S	D	G	T	V	C	A	M	K	A	T
Query Conservation
Alig confidence									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	K	T	V	I	N	A	.	A	L	G	F	D	S	Y	L	V	M	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	R	D	E	Q	S	S	K	Q	L	G	C	Y	F	C	H	D	V	V	A
Template Known Secondary structure		T							.				S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S		S			B			T	T	T	T	S	S	S
Template Predicted Secondary structure									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		454	.	.	.	.	.	460		.	.	.	.	.	.	.	.	.	470	.	.																																								.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		226	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		A	E	G	P	K	R	.	.	M	D	C	A	S	G	F	G	A	A	T	M	V	T	A	T	F	G	F	V	A	V	S	H	A	L	K	K	M	M	A	K	A	A	R	Q	G
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		P	T	D	S	L	T	D	R	T	L	D	Q	M	C	T	V	T	R	P	G	V	A	M	M	A	S	S	L	A	V	E	L	M	T	S	L	L	Q	T	K	Y	S	G	S	E
Template Known Secondary structure						S	T	T			T	T	T																									T	S				T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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