 |
Job Description | Q46927 | Confidence | 95.52% | Date | Thu Jan 5 12:35:56 GMT 2012 |
Rank | 266 | Aligned Residues | 84 |
% Identity | 23% | Template | c3plnA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:udp-glucose 6-dehydrogenase; |
PDBTitle: crystal structure of klebsiella pneumoniae udp-glucose 6-dehydrogenase2 complexed with udp-glucose
|
Resolution | 1.50 Å |
|
 |
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | H | I | C | V | V | G | I | G | G | V | G | S | W | A | A | E | A | L | A | R | T | G | I | G | A | I | T | L | I | D | M | D | D | V | C | V | T | N | T | N | R | Q | I | H | A | L | R | D | N | V | G | L | A | K | A | E | V | M | A | E | R | I | R | Q | I | N | P | E | C | R | V | T | V | V | D | D | F | V | T |
Query Conservation |   |
  |   |
|
|
|
|
|   |
|
|
|
|
|   |
|   |   |   |
|
|   |   |
|
|
|   |
|   |
|
|
|   |
|   |
|   |   |
|
|
|   |
|
|   |
|   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
Template Conservation |   |
|
|
|   |
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|   | . |
|   | . |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |
| . | . | . | . | . | . | . |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . |
Template Sequence |   |
M | K | I | T | I | S | G | T | G | Y | V | G | L | S | N | G | V | L | I | A | Q | . |
N | H | . |
E | V | V | A | L | D | I | V | Q | A | K | V | D | M | L | N | Q | K | I | S | P | I | V | D | . |
. |
. |
. |
. |
. |
. |
K | E | I | Q | E | Y | L | A | E | K | P | L | N | F | R | A | T | . |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T | . | T | S | . |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  | T | T |
|
| S | S |
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
| . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
|
  |
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | N | V | A | Q | Y | M | S | V | G | Y | S | Y | V | I | D | A | I | D | S | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |   |   |   |
|
|   | . |   |   |
|
|
|
|
|
|   |
|
|
|
|
Template Sequence |   |
. |
T | D | K | H | D | A | Y | . |
R | N | A | D | Y | V | I | I | A | T | P | T | D |
Template Known Secondary structure |   |
. | S |
|  |  |  |  |  | . | T | T |
| S |  |  |  |  |
|
|
|
|  |
Template Predicted Secondary structure |   |
. |
|
|  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
65 | . | . | . | . | 70 | . | |
. | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|