Job Description Q46927 Confidence 96.60% Date Thu Jan 5 12:35:56 GMT 2012 Rank 131 Aligned Residues 87 % Identity 21% Template c3fi9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis Resolution 1.90 Å

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		28	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure												.																			.
Query SS confidence												.																			.
Query Sequence		F	A	D	A	H	I	C	V	V	G	.	I	G	G	V	G	S	W	A	A	E	A	L	A	R	T	G	I	G	.	A	I	T	L	I	D	M	D	D	V	C	V	T	N	T	N	R	Q	I	H	A	L	R	D	N	V	G	L	A	K	A	E	V	M	A	E	R	I	R	Q	I	N	P	E	C	R	V	T	V	V
Query Conservation												.																			.
Alig confidence												.																			.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	E	E	K	L	T	I	V	G	A	A	G	M	I	G	S	N	M	A	Q	T	A	A	M	M	R	L	T	P	N	L	C	L	Y	D	P	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	L	E	G	V	A	E	E	I	R	H	C	G	F	E	G	L	N	L	T	F
Template Known Secondary structure		S		S	S						S	T	T	S													T	T			S							S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	F	V	T	P	D	N	V	A	Q	Y	M	S	V	G	Y	S	Y	V	I	D	A	I	D	S	V	R	P	K	A	A	L	I
Query Conservation
Alig confidence				.	.	.	.							.	.
Template Conservation				.	.	.	.							.	.
Template Sequence		T	S	.	.	.	.	D	I	K	E	A	L	.	.	T	D	A	K	Y	I	V	S	S	G	G	T	R	E	D	L	L	K	G	N
Template Known Secondary structure			S	.	.	.	.							.	.	T	T
Template Predicted Secondary structure				.	.	.	.							.	.
Template SS confidence
		65	.					.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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