Return to main results Retrieve Phyre Job Id

Job DescriptionQ46927
Confidence96.18%DateThu Jan 5 12:35:56 GMT 2012
Rank180Aligned Residues87
% Identity18%Templatec3e18A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of nad-binding protein from listeria innocua
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.. .......60.........70.........80.........90.........100.........110
Predicted Secondary structure 


.


























Query SS confidence 




















.

























































Query Sequence  HICVVGIGGVGSWAAEALART. GIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVT
Query Conservation   




 




 
   

  .


 
 


 
 
  


 

 
    


  

      
  


   
        
Alig confidence 




















.










...................









.............




Template Conservation 

 


 
  
  
   
       



 
  ...................          .............     
Template Sequence  QLVIVGYGGMGSYHVTLASAADNLEVHGVFDIL. . . . . . . . . . . . . . . . . . . AEKREAAAQK. . . . . . . . . . . . . GLKIY
Template Known Secondary structure 

STSTT
SS...................TT.............T

B
Template Predicted Secondary structure 









...................
.............

Template SS confidence 















































































   5....10.........20.........30....... ..40....... ..50..
 
   111........120.........130.........140.........150.
Predicted Secondary structure 











Query SS confidence 








































Query Sequence  PDNVAQYMSVGYSYVIDAIDSVRPKAALIAYCRRNKIPLVT
Query Conservation              
 

   
    
  
         
 
 
Alig confidence 




















.


















Template Conservation      


    

 
 
 

 .  
      

  



  
Template Sequence  ESYEAVLADEKVDAVLIATPN. DSHKELAISALEAGKHVVC
Template Known Secondary structure  S

TT


S
G.GGTT
Template Predicted Secondary structure 








.


Template SS confidence 








































   53......60.........70... ......80.........90..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions