Job Description Q46927 Confidence 100.00% Date Thu Jan 5 12:35:56 GMT 2012 Rank 11 Aligned Residues 163 % Identity 25% Template c3cmmA_ PDB info PDB header:ligase/protein binding Chain: A: PDB Molecule:ubiquitin-activating enzyme e1 1; PDBTitle: crystal structure of the uba1-ubiquitin complex Resolution 2.70 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		R	F	G	G	T	A	R	L	Y	G	E	K	A	L	Q	L	F	A	D	A	H	I	C	V	V	G	I	G	G	V	G	S	W	A	A	E	A	L	A	R	T	G	I	.	.	.	.	.	G	A	I	T	L	I	D	M	D	D	V	C	V	T	N	T	N	R	Q	I	H	A	L	R	D	N	V	G	L	A	K	A
Query Conservation																																													.	.	.	.	.
Alig confidence																																													.	.	.	.	.
Template Conservation
Template Sequence		R	Y	D	N	Q	I	A	V	F	G	L	D	F	Q	K	K	I	A	N	S	K	V	F	L	V	G	S	G	A	I	G	C	E	M	L	K	N	W	A	L	L	G	L	G	S	G	S	D	G	Y	I	V	V	T	D	N	D	S	I	E	K	S	N	L	N	R	Q	F	L	F	R	P	K	D	V	G	K	N	K	S
Template Known Secondary structure		T	T																	T									S														T	T	T		S	T	T										B			G	G	G	T	T	T		T	T			G	G	G	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																.	.														.	.	.
Query SS confidence																.	.														.	.	.
Query Sequence		E	V	M	A	E	R	I	R	Q	I	N	P	E	C	.	.	R	V	T	V	V	D	D	F	V	T	P	D	N	.	.	.	V	A	Q	Y	M	S	V	G	Y	S	Y	V	I	D	A	I	D	S	V	R	P	K	A	A	L	I	A	Y	C	R	R	N	K	I	P	L	V	T	T	G	G	A	G	G	Q	I	D	P
Query Conservation																.	.														.	.	.
Alig confidence																.	.														.	.	.
Template Conservation
Template Sequence		E	V	A	A	E	A	V	C	A	M	N	P	D	L	K	G	K	I	N	A	K	I	D	K	V	G	P	E	T	E	E	I	F	N	D	S	F	W	E	S	L	D	F	V	T	N	A	L	D	N	V	D	A	R	T	Y	V	D	R	R	C	V	F	Y	R	K	P	L	L	E	S	G	T	L	G	T	K	G	N	T
Template Known Secondary structure													G	G	G	T	T	T									S	G	G	G	T	T	T	S									S							S	S															T										T	T
Template Predicted Secondary structure
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	I	Q	V	T	D	L	A	K	T	I	Q	D
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		Q	V	I	.	I	P	R	L	T	E	S	Y	S	S
Template Known Secondary structure					.		T	T	T	B			G	G	G
Template Predicted Secondary structure					.
Template SS confidence
		576	.	.		.	580	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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