Job Description Q46927 Confidence 97.43% Date Thu Jan 5 12:35:56 GMT 2012
Rank 36 Aligned Residues 97
% Identity 15% Template c2ph5A_
PDB info
PDB header: transferaseChain: A: PDB Molecule: homospermidine synthase;
PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54
Resolution 2.50 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
30 . . . . . . . . . 40 . . . . . . . . . 50 . .
. . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
D A H I C V V G I G G V G S W A A E A L A R T .
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G I G A I T L I D M D D V C V T N T N R Q I H A L R D N V G L A K A E V M A E R I R Q I N P E C R V T V V D
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
K N R F V I L G F G C V G Q A L X P L I F E K F D I K P S Q V T I I A A E G T K V D .
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V A Q Q Y G V S .
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F K L Q Q I
Template Known Secondary structure  
S S B G G G S S S . . . . . . T . . . . . . . . . . . . . . . . . .
Template Predicted Secondary structure  
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Template SS confidence  
   
13 . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . .
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107 . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
D F V T P D N V A Q Y M S V G Y S Y V I D A I D S V R P K A A L I A Y C R R N K I P L V T
Query Conservation  
                                                                         
Alig confidence  
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Template Conservation  
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Template Sequence  
T P Q N Y L E V I G S T L E E N D F L I D V S I G I S S L A L I .
I L C N Q K G A L Y I N
Template Known Secondary structure  
T T T T G G G T T S S S . T
Template Predicted Secondary structure  
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Template SS confidence  
   
69 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]