Return to main results Retrieve Phyre Job Id

Job DescriptionQ46927
Confidence97.43%DateThu Jan 5 12:35:56 GMT 2012
Rank36Aligned Residues97
% Identity15%Templatec2ph5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.. .......60.........70.........80.........90.........100......
Predicted Secondary structure 



...






















Query SS confidence 






















. . .





















































Query Sequence  DAHICVVGIGGVGSWAAEALART. . . GIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD
Query Conservation     




 




 
   

  ...


 
 


 
 
  


 

 
    


  

      
  


   
    
Alig confidence 






















...















......







..................





Template Conservation    





 
 

 


  
 
  

  




 
  
 
  ......
 
  

 ..................     
Template Sequence  KNRFVILGFGCVGQALXPLIFEKFDIKPSQVTIIAAEGTKVD. . . . . . VAQQYGVS. . . . . . . . . . . . . . . . . . FKLQQI
Template Known Secondary structure 
S


SB


GGGSS

S

......T
..................


Template Predicted Secondary structure 














......



..................


Template SS confidence 















































































   13......20.........30.........40.........50.... .....60.. ......
 
   107..110.........120.........130.........140.........150.
Predicted Secondary structure 















Query SS confidence 












































Query Sequence  DFVTPDNVAQYMSVGYSYVIDAIDSVRPKAALIAYCRRNKIPLVT
Query Conservation                  
 

   
    
  
         
 
 
Alig confidence 































.











Template Conservation 

 
 



  

 
 




 
       

.




 





Template Sequence  TPQNYLEVIGSTLEENDFLIDVSIGISSLALI. ILCNQKGALYIN
Template Known Secondary structure 
TTTTGGG

TT


SSS
.T
Template Predicted Secondary structure 














.



Template SS confidence 












































   6970.........80.........90.........100 .........110..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions