Job Description Q46927 Confidence 97.05% Date Thu Jan 5 12:35:56 GMT 2012
Rank 76 Aligned Residues 78
% Identity 19% Template c1hyhA_
PDB info
PDB header: oxidoreductase (choh(d)-nad+(a))Chain: A: PDB Molecule: l-2-hydroxyisocaproate dehydrogenase;
PDBTitle: crystal structure of l-2-hydroxyisocaproate dehydrogenase from2 lactobacillus confusus at 2.2 angstroms resolution-an example of3 strong asymmetry between subunits
Resolution 2.20 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
31 . . . . . . . . 40 . . . . . . . . . 50 . . . .
. . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
A H I C V V G I G G V G S W A A E A L A R T G I .
G A I T L I D M D D V C V T N T N R Q I H A L R D N V G L A K A E V M A E R I R Q I N P E C R V T V V D D F V
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
R K I G I I G L G N V G A A V A H G L I A Q G V A D D Y V F I D A N E .
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A K V K A D Q I D F Q D A M A N L E .
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A H G N I
Template Known Secondary structure  
S T S S S . . . . . . . . . . . . . . . . . . . G G G S S . . . S
Template Predicted Secondary structure  
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Template SS confidence  
   
22 . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . .
. . . 60 . . . . . . . . . 70 . . . .
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110 . . . . . . . . . 120 . . . . . . . . . 130 . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
T P D N V A Q Y M S V G Y S Y V I D A I D S V
Query Conservation  
                                     
Alig confidence  
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Template Conservation  
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Template Sequence  
V I N D W A A L .
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A D A D V V I S T L G N I
Template Known Secondary structure  
S G G G G . . T T S S G
Template Predicted Secondary structure  
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Template SS confidence  
   
80 . . . . . . .
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]