Return to main results Retrieve Phyre Job Id

Job DescriptionQ46927
Confidence97.05%DateThu Jan 5 12:35:56 GMT 2012
Rank76Aligned Residues78
% Identity19%Templatec1hyhA_
PDB info PDB header:oxidoreductase (choh(d)-nad+(a))Chain: A: PDB Molecule:l-2-hydroxyisocaproate dehydrogenase; PDBTitle: crystal structure of l-2-hydroxyisocaproate dehydrogenase from2 lactobacillus confusus at 2.2 angstroms resolution-an example of3 strong asymmetry between subunits
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.... .....60.........70.........80.........90.........100.........
Predicted Secondary structure 





.























Query SS confidence 























.






















































Query Sequence  AHICVVGIGGVGSWAAEALARTGI. GAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFV
Query Conservation    




 




 
   

  

.
 
 


 
 
  


 

 
    


  

      
  


   
       
Alig confidence 























.









...................

















...




Template Conservation   

 




 

   
  
    
  

 
 
   ...................    
   

        ...    
Template Sequence  RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE. . . . . . . . . . . . . . . . . . . AKVKADQIDFQDAMANLE. . . AHGNI
Template Known Secondary structure 


ST

S
SS...................GGGSS...S

Template Predicted Secondary structure 











...................



...

Template SS confidence 















































































   22.......30.........40.........50...... ...60.........70.... .....
 
   110.........120.........130..
Predicted Secondary structure 








Query SS confidence 






















Query Sequence  TPDNVAQYMSVGYSYVIDAIDSV
Query Conservation               
 

   
  
Alig confidence 







..












Template Conservation         
..  








  
Template Sequence  VINDWAAL. . ADADVVISTLGNI
Template Known Secondary structure  S
GGGG..TT
S

S
G
Template Predicted Secondary structure 

..







Template SS confidence 






















   80....... ..90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions