Job Description P24238 Confidence 99.97% Date Thu Jan 5 11:41:30 GMT 2012 Rank 2 Aligned Residues 146 % Identity 21% Template c3kw0D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:cysteine peptidase; PDBTitle: crystal structure of cysteine peptidase (np_982244.1) from bacillus2 cereus atcc 10987 at 2.50 a resolution Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.							.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.
Query Sequence		N	Y	P	A	E	Y	E	I	G	D	I	V	F	T	C	I	G	A	A	L	F	G	Q	I	S	A	A	S	N	C	W	S	N	H	V	G	I	I	I	G	H	N	G	E	D	F	L	V	A	E	S	R	V	P	L	S	T	I	T	T	L	S	R	F	I	K	R	S	S	N	Q	.	.	.	.	.	.	R	Y	A
Query Conservation																																																																									.	.	.	.	.	.
Alig confidence																																																																									.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	I	N	V	L	K	T	G	D	I	F	L	C	S	G	N	Y	L	V	S	K	L	I	K	K	V	S	E	S	X	F	S	H	T	G	I	I	V	K	W	G	E	H	T	L	I	X	E	S	V	E	D	D	G	V	R	I	V	P	L	E	H	Y	I	K	N	Y	E	N	S	N	N	R	Y	N	G	S	L	F
Template Known Secondary structure				T	T	T			T	T									S											T	S	S											T	T									T	T	T							T							G	G	G	S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		78	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.															.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	R	L	D	.	.	.	.	A	G	L	T	E	R	Q	K	Q	R	I	V	E	Q	V	P	S	R	L	R	K	L	Y	H	T	G	F	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	S	R	Q	F	C	S	K	F	V	F	D	I	Y	K	E	A	L	C	I	P	V	G	E	I	E	T
Query Conservation							.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.						.	.	.	.
Template Conservation																																																																								.						.	.	.	.
Template Sequence		I	A	R	H	E	L	L	Q	N	V	N	D	D	S	E	X	I	R	N	L	I	K	V	G	F	S	L	L	N	S	G	Y	D	K	N	E	I	A	Q	I	V	A	R	I	G	L	G	I	G	R	H	E	D	N	N	E	Y	I	C	S	E	F	V	N	E	C	F	K	K	I	.	G	V	E	F	F	.	.	.	.
Template Known Secondary structure						G	G	G	T	T	S		T	T	S																S																	T					T	T																T	T	.	T					.	.	.	.
Template Predicted Secondary structure																																																																								.						.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	E	L	L	N	S	N	P	N	A	K	L	T	F	W	K	F	W	F	L	G	S	I	P	W	E	R	K	T	V	T	P	A	S	L	W	H	H	P	G	L	V	L	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	P	E	H	I	A	A	D	H	H	V	L	P	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																177	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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