Job Description P24238 Confidence 12.11% Date Thu Jan 5 11:41:30 GMT 2012 Rank 43 Aligned Residues 62 % Identity 19% Template c3k1rA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:harmonin; PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans Resolution 2.30 Å

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		7	.	.	10	.	.	.	.	.	.	.						.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		A	E	Y	E	I	G	D	I	V	F	T	.	.	.	.	.	C	I	G	A	A	L	F	G	Q	I	S	A	A	S	N	C	W	S	N	H	V	G	I	I	I	G	H	N	G	E	D	F	L	V	A	E	S	R	V	P	L	S	T	I	T	T	L	S	R	F	I	K	R	S
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.																		.	.														.
Template Conservation																																			.	.														.
Template Sequence		V	G	L	Q	V	G	D	E	I	V	R	I	N	G	Y	S	I	S	S	C	T	H	E	E	V	I	N	L	I	R	T	E	K	.	.	T	V	S	I	K	V	R	H	I	G	L	I	P	.	V	K	S	S	P	D	E	P	L	T	W	Q	Y	V	D	Q	F	V	S	E	S
Template Known Secondary structure		T	T			T	T							T	T				T	T											T	S	S	S	.	.														.			S	S	T	T	S
Template Predicted Secondary structure																																			.	.														.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions