Return to main results Retrieve Phyre Job Id

Job DescriptionP24238
Confidence12.63%DateThu Jan 5 11:41:30 GMT 2012
Rank40Aligned Residues86
% Identity19%Templatec2obnA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a duf1611 family protein (ava_3511) from anabaena2 variabilis atcc 29413 at 2.30 a resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50...... ...60.........70. ...
Predicted Secondary structure 
















.......



...........


Query SS confidence 











































. . . . . . .














. . . . . . . . . . .


Query Sequence  DIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRV. . . . . . . PLSTITTLSRFIKRS. . . . . . . . . . . SNQ
Query Conservation 



    
  
  
   
 
  





        

 

  ....... 

    
  

   ...........   
Alig confidence 



















......

















.......














...........


Template Conservation 
 








 


 



...... 

 

 

 


 
 
 
          

 
   
 
 
 

         
Template Sequence  DILHIEGQGSLLHPGSTATL. . . . . . PLIRGSQPTQLVLVHRAGQTHNGNNPHVPIPPLPEVIRLYETVASGGGAFGTVP
Template Known Secondary structure  S




TTSTT

T......

STT

B
SS
TTSB


TTTTS



Template Predicted Secondary structure 













......





























Template SS confidence 















































































   226...230.........240..... ....250.........260.........270.........280.........290.........
 
   75....80.........90.........100....
Predicted Secondary structure 








Query SS confidence 





























Query Sequence  RYAIKRLDAGLTERQKQRIVEQVPSRLRKL
Query Conservation     
 
 
  
           
   



Alig confidence 





























Template Conservation 







  

  

           


Template Sequence  VVGIALNTAHLDEYAAKEAIAHTIAETGLP
Template Known Secondary structure 
TTS

S
Template Predicted Secondary structure 








Template SS confidence 





























   300.........310.........320.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions