Return to main results Retrieve Phyre Job Id

Job DescriptionP45956
Confidence8.15%DateThu Jan 5 12:03:53 GMT 2012
Rank50Aligned Residues44
% Identity20%Templated2cq3a1
SCOP infoFerredoxin-like RNA-binding domain, RBD Canonical RBD
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40....... ..50.........60.........70...
Predicted Secondary structure 




.











Query SS confidence 

















.

























Query Sequence  VYVGDVSAKIREMIWEQI. AGLAEEGNVVMAWATNTETGFEFQTF
Query Conservation 



  
  

  

  
.      
 
 

 
  



  


 
Alig confidence 

















.

























Template Conservation 
 
 

    
   
   
   
                  

 
Template Sequence  LHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTF
Template Known Secondary structure  S

TT

GGGTS


TTTT

Template Predicted Secondary structure 






















Template SS confidence 












































   123......130.........140.........150.........160.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions