 |
| Job Description | P45956 | | Confidence | 8.75% | Date | Thu Jan 5 12:03:53 GMT 2012 |
| Rank | 46 | Aligned Residues | 41 |
| % Identity | 12% | Template | c3pgwS_ |
| PDB info |
PDB header:splicing/dna/rna | Chain: S: PDB Molecule:u1-70k; |
PDBTitle: crystal structure of human u1 snrnp
|
| Resolution | 4.40 Å |
|
|   |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
. | . | . | . | 70 |
| Predicted Secondary structure |   |
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . |
|
|  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
| Query Sequence |   |
V | Y | V | G | D | V | S | A | K | I | R | E | M | I | W | E | Q | I | A | G | L | A | E | E | G | N | V | V | M | A | W | A | T | N | T | E | . |
. |
. |
T | G | F | E | F |
| Query Conservation |   |
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |
|
| . | . | . |
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| Template Conservation |   |
|
|
|   |
|
|
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
| Template Sequence |   |
L | F | V | A | R | V | N | Y | D | T | T | E | S | K | L | R | R | E | F | E | V | Y | G | P | I | K | R | I | H | M | V | Y | S | K | R | S | G | K | P | R | G | Y | A | F |
| Template Known Secondary structure |   |
|  |  |  |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  | S |
| B |
|
|
|
|  |  |  |
| S | S |
| S | S |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|