Return to main results Retrieve Phyre Job Id

Job DescriptionP45956
Confidence8.26%DateThu Jan 5 12:03:53 GMT 2012
Rank49Aligned Residues46
% Identity9%Templatec2e44A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:insulin-like growth factor 2 mrna binding PDBTitle: solution structure of rna binding domain in insulin-like2 growth factor 2 mrna binding protein 3
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.........70.....
Predicted Secondary structure 


















Query SS confidence 













































Query Sequence  VYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGL
Query Conservation 



  
  

  

  
      
 
 

 
  



  


 
 
Alig confidence 













































Template Conservation 
 
 


   

 

   
   
 
  
           
 
 
  
Template Sequence  LQIRNIPPHLQWEVLDSLLVQYGVVESCEQVNTDSETAVVNVTYSS
Template Known Secondary structure 
SSS
S


SSSSSS
Template Predicted Secondary structure 


















Template SS confidence 













































   83......90.........100.........110.........120........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions