Return to main results Retrieve Phyre Job Id

Job DescriptionP45956
Confidence5.78%DateThu Jan 5 12:03:53 GMT 2012
Rank80Aligned Residues25
% Identity28%Templatec1ei1B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:dna gyrase b; PDBTitle: dimerization of e. coli dna gyrase b provides a structural mechanism2 for activating the atpase catalytic center
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30...... ...40.........50.
Predicted Secondary structure 







..

Query SS confidence 









. .














Query Sequence  RAGVYVGDVS. . AKIREMIWEQIAGLA
Query Conservation    




  
..  

  

  
    
Alig confidence 









..














Template Conservation 

 



      

  

 


 


Template Sequence  RPGMYIGDTDDGTGLHHMVFEVVDNAI
Template Known Secondary structure  ST

SSSS
Template Predicted Secondary structure 








Template SS confidence 


























   422.......430.........440........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions