 |
Job Description | P0AFW0 | Confidence | 29.00% | Date | Thu Jan 5 11:27:24 GMT 2012 |
Rank | 42 | Aligned Residues | 50 |
% Identity | 18% | Template | d2pu9b1 |
SCOP info | SH3-like barrel
| Electron transport accessory proteins
| Ferredoxin thioredoxin reductase (FTR), alpha (variable) chain
|
Resolution | 1.65 |
|
 |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
|
|
. | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 130 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
| . | . | . | . | . | . |
|
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | Y | P | G | D | K | V | I | I | T | E | . |
. |
. |
. |
. |
. |
G | A | . |
. |
. |
. |
. |
. |
. |
. |
F | E | G | F | Q | A | I | F | T | E | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | G | E | A | R | S | M | L | L | L | N | L | I | N | K | E | I | K | H | S | V | K | N | T | E | F | R | K | L |
Query Conservation |   |
  |   |   |
|   |   |
|   |
|   |   | . | . | . | . | . | . |
|
| . | . | . | . | . | . | . | . |
|   |
|   |   |
|   |
|   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|
|   |   |
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |
|
|   |
|
|
|
|   |
|   |   |   |
|   |   |
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |
| . | . | . |   |   |
|
|   |
|
|
|
|
|
|
|   |
|   |
|
Template Sequence |   |
M | N | V | G | D | R | V | R | V | T | S | S | V | V | V | Y | H | H | P | E | H | K | K | T | A | F | D | L | Q | G | M | E | G | E | V | A | A | V | L | T | E | W | Q | G | R | P | I | S | A | N | L | P | V | L | V | K | F | . |
. |
. |
E | Q | R | F | K | A | H | F | R | P | D | E | V | T | L | I |
Template Known Secondary structure |   |
|
| T | T |
|  |  |  |  |
| S |
|
|  |  | S |
|
| T | T | S | T | T | S |
|  |  |
| T | T |
|  |  |  |  |  |  |  |
| S |  |  | T | T |  |  |
|
|
| S | S |
|  |  |  |  |
| . | . | . | G | G | G |
|  |  |  |  |
| G | G | G |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  | . | . | . |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|