Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFW0
Confidence69.88%DateThu Jan 5 11:27:24 GMT 2012
Rank32Aligned Residues47
% Identity17%Templatec4a19F_
PDB info PDB header:ribosomeChain: F: PDB Molecule:rpl14; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 26s rrna and3 proteins of molecule 2.
Resolution3.52 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.........150.........160
Predicted Secondary structure 



















Query SS confidence 

















































Query Sequence  YPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFR
Query Conservation    
  
 
  


 
  
 
       
  
 
   
    
 
    
 
Alig confidence 

































...












Template Conservation 





 
  
   


 






 







...

 

 
 

 
 
Template Sequence  QVGRVVYINYGADKGKLAVIVNIINQNRILIDGE. . . HIVRQVIPIRRVH
Template Known Secondary structure 
TT
SSTTTTTTTT...TGGG
Template Predicted Secondary structure 











...







Template SS confidence 

















































   8.10.........20.........30.........40. ........50....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions