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Job Description | P0AFW0 | Confidence | 22.52% | Date | Thu Jan 5 11:27:24 GMT 2012 |
Rank | 48 | Aligned Residues | 57 |
% Identity | 16% | Template | c3iz6D_ |
PDB info |
PDB header:ribosome | Chain: D: PDB Molecule:40s ribosomal protein s4 (s4e); |
PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
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Resolution | 5.50 Å |
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99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | K | P | K | D | I | V | D | P | A | T | P | Y | P | G | D | K | V | I | I | T | E | G | A | F | E | G | F | Q | A | I | F | T | E | P | . |
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D | G | E | A | R | S | M | L | L | L | N | L | I | N | K | E | I | K | H | S | V | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | E | T | N | K | I | V | D | F | I | K | F | D | V | G | N | V | V | M | V | T | G | G | R | N | T | G | R | V | G | V | I | K | N | R | E | K | H | K | G | S | F | E | T | I | H | V | E | D | A | L | G | H | Q | F | A | T | R | L | G |
Template Known Secondary structure |   |
S | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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