Job Description P0AFW0 Confidence 14.20% Date Thu Jan 5 11:27:24 GMT 2012 Rank 62 Aligned Residues 57 % Identity 14% Template c2xzmW_ PDB info PDB header:ribosome Chain: W: PDB Molecule:40s ribosomal protein s4; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 Resolution 3.93 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		Y	K	P	K	D	I	V	D	P	A	T	P	Y	P	G	D	K	V	I	I	T	E	G	A	F	E	G	F	Q	A	I	F	T	E	P	.	.	.	D	G	E	A	R	S	M	L	L	L	N	L	I	N	K	E	I	K	H	S	V	K
Query Conservation																																					.	.	.
Alig confidence																																					.	.	.
Template Conservation
Template Sequence		L	V	N	N	K	I	E	N	F	A	H	L	E	S	G	N	V	C	Y	I	Q	Q	G	N	N	I	G	R	V	G	I	I	Q	H	I	E	K	H	Q	G	S	F	D	I	C	H	V	K	D	A	K	G	N	A	F	A	T	R	L	G
Template Known Secondary structure		T	T	T	T							B			S	S							S	S	T	T	T	T													S	S									T	T								G	G
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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